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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDE6C, phosphodiesterase 6C, cGMP-specific, cone, alpha prime
Sequence ID:NM_006204
RefSeqGene ID:NG_016752
Entrez Gene ID:5146
Ensembl ID:ENSG00000095464

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 95372344 - 95425428

 Exon Info From UCSC:
NM_006204

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40080654BC111377phosphodiesterase 6C, cGMP-specific, cone, alpha prime

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006195  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006204 NP_006195 P51160 EC 3.1.4.35 PDEase_I
GAF

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U31973 AAA96392 P51160 EC 3.1.4.35
BC111377 AAI11378 P51160 EC 3.1.4.35

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDE6C NP_006195 M.musculus Pde6c 110855 Gene Info NP_291092 87
R.norvegicus Pde6c 361752   NP_001101992 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)