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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC9A3, solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3
Sequence ID:NM_004174
Entrez Gene ID:6550
Ensembl ID:ENSG00000066230

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p15.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 481020 - 524549

 Exon Info From UCSC:
NM_004174

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069175Full LengthBC101669solute carrier family 9 (sodium/hydrogen exchanger), member 3
8069177Full LengthBC101671solute carrier family 9 (sodium/hydrogen exchanger), member 3
9051833Full LengthBC143328solute carrier family 9 (sodium/hydrogen exchanger), member 3
4548905IncompleteBC011555solute carrier family 9 (sodium/hydrogen exchanger), member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004165  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004174 NP_004165 P48764 Na_H_Exchanger

Related Sequences

 
mRNAGenPeptSwissProt
U28043 AAB48990 P48764
S83545 AAB50819 O00617
BC101669 AAI01670 P48764
BC101671 AAI01672 P48764
BC143328 AAI43329 B7ZKR2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC9A3 NP_004165 R.norvegicus Slc9a3 24784   NP_036786 90
M.musculus Slc9a3 105243 Gene Info NP_001074529 90
D.melanogaster Nhe2 35376   NP_001137851 48
A.gambiae AgaP_AGAP009036 1279995   XP_552951 47
C.elegans nhx-9 178126   NP_001023627 46
C.elegans nhx-3 183811   NP_001023735 46
C.elegans nhx-2 174242   NP_495614 41
C.elegans nhx-6 186511   NP_001022215 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)