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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HTR5A, 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled
Sequence ID:NM_024012
Entrez Gene ID:3361
Ensembl ID:ENSG00000157219

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 154862609 - 154876197

NM_024012 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1805154862545154863349
8062400154875864154877458

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322520Full LengthBC1134685-hydroxytryptamine (serotonin) receptor 5A
8327489Full LengthBC1120215-hydroxytryptamine (serotonin) receptor 5A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076917  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024012 NP_076917 P47898 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC112021 AAI12022 P47898
BC113468 AAI13469 Q14D80
AF498985 AAM21132 P47898
HQ258207 ADR82961  
AK094255 BAG52850 A4D2N2
AK303289 BAH13932 B7Z8E6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HTR5A NP_076917 R.norvegicus Htr5a 25689   NP_037280 88
M.musculus Htr5a 15563 Gene Info NP_032340 88
C.elegans tyra-2 180970   NP_001033537 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)