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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RNF180, Ring finger protein 180
Sequence ID:NM_001113561
NM_178532
Entrez Gene ID:285671
Ensembl ID:ENSG00000164197

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 63461670 - 63513613

 Exon Info From UCSC:
NM_001113561
NM_178532

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40024386Full LengthBC101277ring finger protein 180
40024390Full LengthBC101278ring finger protein 180
40024392Full LengthBC101397ring finger protein 180

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113561 NP_001107033 Q86T96  
NM_178532 NP_848627    

Related Sequences

 
mRNAGenPeptSwissProt
BC101277 AAI01278 Q86T96
BC101278 AAI01279 Q86T96
BC101279 AAI01280 Q86T96
BC101397 AAI01398 Q86T96
AK090756 BAC03514 Q86T96
AL832580 CAD89939 Q86T96
AM393544 CAL38421  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF180 NP_001107033 R.norvegicus Rnf180 685384   NP_001128458 83
M.musculus Rnf180 71816 Gene Info NP_082210 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)