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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CPSF2, cleavage and polyadenylation specific factor 2, 100kDa
Sequence ID:NM_017437
Entrez Gene ID:53981
Ensembl ID:ENSG00000165934

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 92604638 - 92630543

 Exon Info From UCSC:
NM_017437

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5267724Full LengthBC070095cleavage and polyadenylation specific factor 2, 100kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059133  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017437 NP_059133 Q9P2I0 Lactamase_B
RMMBL

Related Sequences

 
mRNAGenPeptSwissProt
BC070095 AAH70095 Q9P2I0
AB037788 BAA92605 Q9P2I0
AK001627 BAG50953 Q9P2I0
AK001912 BAG50992 B3KMI0
AK023583 BAG51207 B3KN45
AL442079 CAC09445 Q9P2I0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPSF2 NP_059133 M.musculus Cpsf2 51786 Gene Info NP_058552 98
R.norvegicus Cpsf2 299256   NP_001100223 98
D.melanogaster Cpsf100 43426   NP_651658 59
A.gambiae AgaP_AGAP002474 1273485   XP_312464 58
C.elegans cpsf-2 179103   NP_504822 45
A.thaliana CPSF100 832453   NP_197776 42
S.pombe cft2 2539954   NP_595448 35
N.crassa NCU06869 3874225   XP_958078 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta