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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CDKAL1, CDK5 regulatory subunit associated protein 1-like 1
Sequence ID:NM_017774
RefSeqGene ID:NG_021195
Entrez Gene ID:54901
Ensembl ID:ENSG00000145996

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DIABETES MELLITUS, NON-INSULIN-DEPENDENTABCC8
AKT2
ENPP1
GCGR
GCK
GPD2
HMGA1
HMGA1
HNF1A
HNF1B
HNF4A
IGF2BP2
IL6
IRS1
IRS2
KCNJ11
LIPC
MAPK8IP1
MTNR1B
NEUROD1
NEUROD1
NEUROD1
PAX4
PDX1
PPARG
PTPN1
RETN
SLC2A4
SLC30A8
TCF7L2
VEGFA
WFS1
WFS1

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 21065349 - 21232632

 Exon Info From UCSC:
NM_017774

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40117357Full LengthBC121020CDK5 regulatory subunit associated protein 1-like 1
40117363Full LengthBC121021CDK5 regulatory subunit associated protein 1-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060244  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017774 NP_060244 Q5VV42 UPF0004
TRAM
Radical_SAM

Related Sequences

 
mRNAGenPeptSwissProt
BC064145 AAH64145 Q5VV42
BC121020 AAI21021 Q5VV42
BC121021 AAI21022 Q5VV42
AK000349 BAA91102 Q5VV42
AK128546 BAC87494 Q5VV42
AK291735 BAF84424 Q5VV42

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDKAL1 NP_060244 M.musculus Cdkal1 68916 Gene Info NP_653119 92
D.melanogaster CG6550 36954   NP_611207 64
A.gambiae AgaP_AGAP005211 1274919   XP_314113 63
C.elegans Y92H12BL.1 190786   NP_740783 58
A.thaliana AT1G72090 843540   NP_565035 56
P.falciparum PFF1070c 3885853   XP_966205 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)