Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARNTL, Aryl hydrocarbon receptor nuclear translocator-like
Sequence ID:NM_001030273
NM_001178
NM_001030272
Entrez Gene ID:406
Ensembl ID:ENSG00000133794

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 13371585 - 13408778

 Exon Info From UCSC:
NM_001030273
NM_001178
NM_001030272

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3921870Full LengthBC016674aryl hydrocarbon receptor nuclear translocator-like
4793007Full LengthBC031214aryl hydrocarbon receptor nuclear translocator-like
5753529Full LengthBC041129aryl hydrocarbon receptor nuclear translocator-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001025443  NP_001025444  NP_001169  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001030272 NP_001025443   HLH
PAS
PAS_3
NM_001030273 NP_001025444   HLH
PAS
PAS_3
NM_001178 NP_001169   HLH
PAS
PAS_3

Related Sequences

 
mRNAGenPeptSwissProt
U60415 AAB37248 O00327
AF044288 AAC24353 O00327
U51627 AAC51213 O00327
BC016674 AAH16674 O00327
BC031214 AAH31214 O00327
BC041129 AAH41129 O00327
EU446463 ABZ91992  
JF432385 ADZ15602  
AB000812 BAA19935 O00327
AB000814 BAA19937 O00327
AB000815 BAA19938 O00327
AB000816 BAA19939 O00327
D89722 BAA19968 O00327
AK291510 BAF84199 O00327
AK315174 BAG37615 B2RCL8
AK095749 BAG53120 O00327

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARNTL NP_001169 M.musculus Arntl 11865 Gene Info NP_031515 98
R.norvegicus Arntl 29657   NP_077338 98
A.gambiae AgaP_AGAP005655 1276339   XP_556301 55
D.melanogaster cyc 40162   NP_524168 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta