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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTNNA1, Catenin (cadherin-associated protein), alpha 1, 102kDa
Sequence ID:NM_015564
Entrez Gene ID:1495
Ensembl ID:ENSG00000044115

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 138205078 - 138211009

NM_015564 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15167138205078138210244
51685628138210596138211056

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821111Full LengthBC000385catenin (cadherin-associated protein), alpha 1, 102kDa
5274351Full LengthBC031262catenin (cadherin-associated protein), alpha 1, 102kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056379  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001903 NP_001894 P35221 Vinculin
NM_015564 NP_056379 O43300 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
U03100 AAA18949 P35221
L22080 AAA35502 P35221
L23805 AAA86430 P35221
BC000385 AAH00385 P35221
BC031262 AAH31262 Q8N1C0
BC126408 AAI26409 O43300
BC126410 AAI26411 O43300
BC143926 AAI43927 O43300
AY182026 AAO67547 O43300
DQ891250 ABM82176  
DQ894435 ABM85361  
HQ258294 ADR83048  
HQ589335 AEF32483 Q8N1C0
D13866 BAA02979 P35221
D14705 BAA03530 P35221
AB007876 BAA24846 O43300
AK291064 BAF83753 O43300
AK094151 BAG52830 B3KSR8
AK296708 BAG59301 B4DKT9
AK300439 BAG62162 B4DU00
AK304267 BAG65130 B4E2G8
AK297332 BAH12550 B7Z4G4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTNNA1 NP_001894 M.musculus Ctnna1 12385 Gene Info NP_033948 99
R.norvegicus Ctnna1 307505   NP_001007146 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta