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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GTF3C4, general transcription factor IIIC, polypeptide 4, 90kDa
Sequence ID:NM_012204
Entrez Gene ID:9329
Ensembl ID:ENSG00000125484

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 135565227 - 135565829

NM_012204 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1615135545727135546341
6162442135553363135555189
24432573135558949135559079
25742662135562625135562713
26633863135564267135565467

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4830453Full LengthBC094774general transcription factor IIIC, polypeptide 4, 90kDa
8143758Full LengthBC104755general transcription factor IIIC, polypeptide 4, 90kDa
8327713Full LengthBC112245general transcription factor IIIC, polypeptide 4, 90kDa
3845225IncompleteBC022787general transcription factor IIIC, polypeptide 4, 90kDa
3960260IncompleteBC011619general transcription factor IIIC, polypeptide 4, 90kDa

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_012204 NP_036336 Q9UKN8 EC 2.3.1.48  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF142328 AAF05087 Q9UKN8 EC 2.3.1.48
BC011619 AAH11619 Q9UKN8 EC 2.3.1.48
BC022787 AAH22787 Q05CN7  
BC094774 AAH94774 Q9UKN8 EC 2.3.1.48
BC104755 AAI04756 Q9UKN8 EC 2.3.1.48
BC112245 AAI12246 Q9UKN8 EC 2.3.1.48
AK027509 BAG51334 B3KNH2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GTF3C4 NP_036336 M.musculus Gtf3c4 269252 Gene Info NP_766565 94
R.norvegicus Gtf3c4 685539   NP_001102943 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta