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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MECOM, MDS1 and EVI1 complex locus
Sequence ID:NM_001164000
NM_004991
NM_001205194
NM_001105077
NM_001105078
NM_005241
NM_001163999
RefSeqGene ID:NG_028279
Entrez Gene ID:2122
Ensembl ID:ENSG00000085276

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 168840470 - 168864076

 Exon Info From UCSC:
NM_001164000
NM_004991
NM_001105077
NM_001105078
NM_005241
NM_001163999

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052469Full LengthBC143951ecotropic viral integration site 1
9052470Full LengthBC143952ecotropic viral integration site 1
40146551Full LengthBC130520ecotropic viral integration site 1
4689522IncompleteBC031019ecotropic viral integration site 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005232  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001105077 NP_001098547    
NM_001105078 NP_001098548    
NM_001163999 NP_001157471    
NM_001164000 NP_001157472    
NM_001205194 NP_001192123    
NM_004991 NP_004982 Q13465  
NM_005241 NP_005232 Q03112 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
U43292 AAB05839 Q13465
U43293 AAB05840 Q13465
S82592 AAB37456 Q03112
AF164154 AAF04008 Q9UBK3
AF164155 AAF04009 Q9UBK3
AF164156 AAF04010 Q9UBK3
AF164157 AAF04011 Q9UBK3
BC031019 AAH31019 Q03112
BC069498 AAH69498 Q13465
BC130520 AAI30521 Q03112
BC143951 AAI43952 Q03112
BC143952 AAI43953 Q03112
AF487422 AAN39687 Q8IZU7
AF487423 AAN39688 Q8IU84
AF487424 AAN39689 Q8IU84
EU832231 ACE86801  
EU832138 ACE87488  
GQ352634 ACU31119 C7FEN9
AK292865 BAF85554 Q03112
AK304098 BAH14103 Q03112
X54989 CAA38735 Q03112
BX640908 CAE45952 Q03112
CR541866 CAG46664 Q13465
CR541886 CAG46684 Q13465
BX647613 CAI46086 Q03112

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MECOM NP_004982 M.musculus Mecom 14013 Gene Info NP_031989 92
A.gambiae AgaP_AGAP008232 4578130   XP_317239 43
D.melanogaster ham 35135   NP_724130 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)