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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. AMMECR1, Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
Sequence ID:NM_001025580
NM_001171689
NM_015365
RefSeqGene ID:NG_016469
Entrez Gene ID:9949
Ensembl ID:ENSG00000101935

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 109441617 - 109561467

 Exon Info From UCSC:
NM_001025580
NM_001171689
NM_015365

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30344824Full LengthBC060813Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
5140448IncompleteBC024762Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1
5405764IncompleteBC037983Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1
6168870IncompleteBC051895Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056180  NP_001020751  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025580 NP_001020751   AMMECR1
NM_001171689 NP_001165160    
NM_015365 NP_056180 Q9Y4X0 AMMECR1

Related Sequences

 
mRNAGenPeptSwissProt
BC060813 AAH60813 Q9Y4X0
HQ448514 ADQ32993  
AK314596 BAG37168 B2RBC1
AK001703 BAG50964 B3KMF2
AK091430 BAG52359 Q9Y4X0
AJ007014 CAB45546 Q9Y4X0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AMMECR1 NP_056180 M.musculus Ammecr1 56068 Gene Info NP_062369 98
R.norvegicus RGD1561004 501539   XP_002730257 98
D.melanogaster CG5902 42839   NP_732929 67
A.gambiae AgaP_AGAP000328 1271931   XP_310788 55
A.thaliana AT2G38710 818453   NP_001031509 55
C.elegans R166.3 174621   NP_496270 48
N.crassa NCU06113 3876113   XP_959975 44
S.pombe SPAC688.03c 2543480   NP_594062 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)