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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH23, cadherin-related 23
Sequence ID:NM_001171930
NM_001171931
NM_001171932
NM_001171933
NM_001171934
NM_001171935
NM_001171936
NM_022124
NM_052836
RefSeqGene ID:NG_008835
Entrez Gene ID:64072
Ensembl ID:ENSG00000107736

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DEAFNESS, AUTOSOMAL RECESSIVE 12, MODIFIER OFATP2B2
USHER SYNDROME, TYPE 1DPCDH15

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 73556612 - 73575653

 Exon Info From UCSC:
NM_001171930
NM_001171931
NM_001171932
NM_001171933
NM_001171934
NM_001171935
NM_001171936
NM_022124
NM_052836

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443068  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171930 NP_001165401    
NM_001171931 NP_001165402    
NM_001171932 NP_001165403    
NM_001171933 NP_001165404    
NM_001171934 NP_001165405    
NM_001171935 NP_001165406    
NM_001171936 NP_001165407    
NM_022124 NP_071407 Q9H251  
NM_052836 NP_443068   Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
AY010111 AAG27034 Q9H251
AF312024 AAG48303 Q9H251
BC011570 AAH11570 Q9H251
BC032581 AAH32581 Q8N5B3
BC065284 AAH65284 Q6P152
BC108254 AAI08255 Q32P55
BC136976 AAI36977 Q9H251
BC136977 AAI36978 Q9H251
BC139903 AAI39904 A5D6V9
AY358617 AAQ88980 Q9H251
AY563161 AAT72161 Q5QGS6
AY563162 AAT72162 Q5QGS5
AY563165 AAT72165 Q9H251
AY563166 AAT72166 Q5QGS1
JF432310 ADZ15527  
AB058715 BAB47441 Q9H251
AB053445 BAB61902 Q9H251
AK074160 BAB84986 Q8TEG4
AK093818 BAC04231 Q8N1Z7
AL122081 CAB59256 Q9UFG9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH23 NP_071407 R.norvegicus Cdh23 114102   NP_446096 95
M.musculus Cdh23 22295 Gene Info NP_075859 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)