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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC13A3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
Sequence ID:NM_001011554
NM_001193339
NM_001193340
NM_001193342
NM_022829
Entrez Gene ID:64849
Ensembl ID:ENSG00000158296

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 45187052 - 45280079

 Exon Info From UCSC:
NM_001011554
NM_001193339
NM_001193340
NM_001193342
NM_022829

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4609776Full LengthBC035966solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
3919985IncompleteBC014931solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_073740  NP_001011554  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001011554 NP_001011554   Na_sulph_symp
NM_001193339 NP_001180268    
NM_001193340 NP_001180269    
NM_001193342 NP_001180271    
NM_022829 NP_073740 Q8WWT9 Na_sulph_symp

Related Sequences

 
mRNAGenPeptSwissProt
AF154121 AAF73251 Q8WWT9
BC035966 AAH35966 Q8WWT9
AY072810 AAL66762 Q8WWT9
DQ892655 ABM83581  
DQ895894 ABM86820  
AK056713 BAB71262 Q8WWT9
AK096658 BAC04834 Q8WWT9
AK293902 BAG57288 B4DF27
AK295748 BAG58580 Q8WWT9
AK303709 BAG64693 B4E181
AL442082 CAC09447 Q8WWT9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC13A3 NP_073740 M.musculus Slc13a3 114644 Gene Info NP_473396 88
R.norvegicus Slc13a3 64846   NP_074057 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)