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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCDC101, coiled-coil domain containing 101
Sequence ID:NM_138414
Entrez Gene ID:112869
Ensembl ID:ENSG00000176476

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 28565289 - 28603110

NM_138414 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11702856524828565417
1712602859237528592464
2613362859623328596308
3374092859696828597040
4104742860042028600484
4756042860141628601545
6057512860161628601762
7527872860195128601986
7889502860209328602255
95111502860291028603109

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3863665Full LengthBC011981coiled-coil domain containing 101

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612423  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138414 NP_612423 Q96ES7 DUF1325

Related Sequences

 
mRNAGenPeptSwissProt
BC011981 AAH11981 Q96ES7
AK057008 BAB71340 Q96ES7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC101 NP_612423 M.musculus Ccdc101 75565 Gene Info NP_083615 98
R.norvegicus Ccdc101 293488   NP_001107974 98
A.gambiae AgaP_AGAP005116 1274793   XP_313997 55
D.melanogaster Sgf29 37429   NP_726051 53
C.elegans Y17G9B.8 177246   NP_500635 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)