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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PVRL2, Poliovirus receptor-related 2 (herpesvirus entry mediator B)
Sequence ID:NM_001042724
NM_002856
RefSeqGene ID:NG_029149
Entrez Gene ID:5819
Ensembl ID:ENSG00000130202

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 45349633 - 45382195

 Exon Info From UCSC:
NM_001042724
NM_002856

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3503222Full LengthBC003091poliovirus receptor-related 2 (herpesvirus entry mediator B)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002847  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042724 NP_001036189 Q92692  
NM_002856 NP_002847   ig
V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
AF058448 AAC23797 Q92692
BC003091 AAH03091 Q92692
DQ891829 ABM82755  
DQ895015 ABM85941  
AK291330 BAF84019 A8K5L5
X80038 CAA56342 Q92692
CR456818 CAG33099 Q92692

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PVRL2 NP_001036189 M.musculus Pvrl2 19294 Gene Info NP_033016 76
R.norvegicus Pvrl2 308417   NP_001012064 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)