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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NDE1, nudE nuclear distribution E homolog 1 (A. nidulans)
Sequence ID:NM_001143979
NM_017668
RefSeqGene ID:NG_021210
Entrez Gene ID:54820
Ensembl ID:ENSG00000072864

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 15744103 - 15818990

 Exon Info From UCSC:
NM_001143979
NM_017668

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140369Full LengthBC001421nudE nuclear distribution gene E homolog 1 (A. nidulans)
4828494Full LengthBC033900nudE nuclear distribution gene E homolog 1 (A. nidulans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060138  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001143979 NP_001137451    
NM_017668 NP_060138 Q9NXR1 NUDE_C

Related Sequences

 
mRNAGenPeptSwissProt
BC001421 AAH01421 Q9NXR1
BC033900 AAH33900 Q9NXR1
AK000108 BAA90949 Q9NXR1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDE1 NP_001137451 M.musculus Nde1 67203 Gene Info NP_075806 91
R.norvegicus Nde1 83836   NP_445799 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)