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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C11orf31, chromosome 11 open reading frame 31
Sequence ID:NM_170746
Entrez Gene ID:280636
Ensembl ID:ENSG00000211450

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 57510503 - 57511018

NM_170746 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14685750872157509188
4696145750928057509425
6157455750958857509718
74612945751033457510882

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4766360Full LengthBC021122chromosome 11 open reading frame 31

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_170746 NP_734467 Q8IZQ5  

Related Sequences

 
mRNAGenPeptSwissProt
BC021122 AAH21122 Q8IZQ5
AF536829 AAN61472 Q8IZQ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C11orf31 NP_734467 M.musculus 2700094K13Rik 72657 Gene Info NP_001028338 85
R.norvegicus RGD1563348 502642   NP_001108411 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)