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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MSRB1, Methionine sulfoxide reductase B1
Sequence ID:NM_016332
Entrez Gene ID:51734
Ensembl ID:ENSG00000198736

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 1988242 - 1993252

NM_016332 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2193019882341989143
931104519907781990892
1046119419912571991405
1195138619931021993293

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2905838Full LengthBC003127selenoprotein X, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057416  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016332 NP_057416 Q9NZV6 SelR

Related Sequences

 
mRNAGenPeptSwissProt
AF166124 AAF21429 Q9NZV6
AF161388 AAF28948 Q9NZV6
AF187272 AAG17033 Q9NZV6
BC003127 AAH03127 Q9NZV6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MSRB1 NP_057416 R.norvegicus Sepx1 685059   NP_001037750 93
M.musculus Sepx1 27361 Gene Info NP_038787 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)