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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPS18B, mitochondrial ribosomal protein S18B
Sequence ID:NM_014046
Entrez Gene ID:28973
Ensembl ID:ENSG00000204568

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 30585635 - 30594167

NM_014046 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12353058548530585719
2363443058726930587377
3454423058748530587582
4435113058769730587765
5125783059060830590674
5796383059265930592718
63915343059327830594173

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3933607Full LengthBC005373mitochondrial ribosomal protein S18B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054765  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014046 NP_054765 Q9Y676 Ribosomal_S18

Related Sequences

 
mRNAGenPeptSwissProt
AF100761 AAD43025 Q9Y676
AF151017 AAF36103 Q9Y676
BC005373 AAH05373 Q9Y676
AK311890 BAG34831 B0S7P4
AK294086 BAG57427 B4DFG6
AL050361 CAH56415 Q9Y676

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPS18B NP_054765 M.musculus Mrps18b 66973 Gene Info NP_080154 79
R.norvegicus Mrps18b 294230   NP_997699 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)