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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PFDN5, prefoldin subunit 5
Sequence ID:NM_002624
NM_145897
NM_145896
RefSeqGene ID:NG_029695
Entrez Gene ID:5204
Ensembl ID:ENSG00000123349

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 53689325 - 53693231

 Exon Info From UCSC:
NM_002624
NM_145897

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6458093Full LengthBC062671prefoldin subunit 5
2900793IncompleteBC003373prefoldin subunit 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_665904  NP_002615  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002624 NP_002615 Q99471 Prefoldin
NM_145897 NP_665904   Prefoldin

Related Sequences

 
mRNAGenPeptSwissProt
BC062671 AAH62671 Q99471
BT007195 AAP35859 Q99471
AB055803 BAB32644 Q99471
AB055804 BAB32645 Q99471
AB055805 BAB32646 Q99471
AK292623 BAF85312 Q99471

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PFDN5 NP_002615 M.musculus Pfdn5 56612 Gene Info NP_081320 99
R.norvegicus Pfdn5 300257   NP_001100264 99
S.pombe bob1 2540664   NP_596679 44
A.gambiae AgaP_AGAP003416 1272789   XP_311700 43
N.crassa NCU02963 3881513   XP_965350 41
S.cerevisiae GIM5 854879   NP_013616 38
A.thaliana PFD5 832393   NP_197720 37
D.melanogaster CG7048 42647   NP_001163688 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)