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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C8orf40, Chromosome 8 open reading frame 40
Sequence ID:NM_001135674
NM_001135675
NM_138436
NM_001135676
Entrez Gene ID:114926
Ensembl ID:ENSG00000176209

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 42397192 - 42407751

 Exon Info From UCSC:
NM_001135674
NM_001135675
NM_138436
NM_001135676

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3535608Full LengthBC013035chromosome 8 open reading frame 40

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135674 NP_001129146    
NM_001135675 NP_001129147    
NM_001135676 NP_001129148    
NM_138436 NP_612445 Q96E16  

Related Sequences

 
mRNAGenPeptSwissProt
BC013035 AAH13035 Q96E16
HQ448681 ADQ33159  
AK311932 BAG34873 Q96E16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C8orf40 NP_001129146 M.musculus AI316807 102032 Gene Info NP_001012685 86
R.norvegicus LOC100362321 100362321   XP_002728462 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)