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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. IFT122, intraflagellar transport 122 homolog (Chlamydomonas)
Sequence ID:NM_018262
NM_052985
NM_052989
NM_052990
RefSeqGene ID:NG_023392
Entrez Gene ID:55764
Ensembl ID:ENSG00000163913

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 129158981 - 129239188

 Exon Info From UCSC:
NM_018262
NM_052985
NM_052989
NM_052990

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2823536Full LengthBC003045intraflagellar transport 122 homolog (Chlamydomonas)
2823536Full LengthBC004238intraflagellar transport 122 homolog (Chlamydomonas)
4836844Full LengthBC028353intraflagellar transport 122 homolog (Chlamydomonas)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443716  NP_060732  NP_443711  NP_443715  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018262 NP_060732   WD40
NM_052985 NP_443711   WD40
NM_052989 NP_443715 Q9HBG6 WD40
NM_052990 NP_443716   WD40

Related Sequences

 
mRNAGenPeptSwissProt
AF302154 AAG13415 Q9HBG6
AF244930 AAG15427 Q9HBG6
AF244931 AAG15428 Q9HBG5
BC003045 AAH03045 Q9HBG6
BC004238 AAH04238 Q9HBG6
BC028353 AAH28353 Q8TC06
EU832704 ACE87036  
EU832629 ACE87720  
AK001759 BAA91888 Q9NV68
AK001955 BAA92000 Q9NUW6
AK022525 BAB14077 Q9H9Z0
AK024435 BAB15725 Q9H7P3
AK223095 BAD96815 Q9HBG6
AK023000 BAG51146 B3KMY4
AK094922 BAG52955 B3KT43
AK096891 BAG53393 B3KUD1
AK122965 BAG53823 B3KVL1
AK124140 BAG54015 B3KW53
AK293852 BAG57250 B4DEY9
AK294515 BAG57728 B4DGB7
AK298526 BAG60729 B4DPW7
AK299903 BAG61744 B4DST2
AL133565 CAB63718 Q7L8K0
AL833851 CAD38710 Q8NDL0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFT122 NP_443715 M.musculus Ift122 81896 Gene Info NP_112454 91
R.norvegicus Ift122 312651   XP_001057925 91
D.melanogaster Oseg1 38957   NP_648221 45
A.gambiae AgaP_AGAP006535 1277134   XP_316573 44
C.elegans daf-10 184883   NP_501591 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)