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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXA5, Homeobox A5
Sequence ID:NM_019102
Entrez Gene ID:3202
Ensembl ID:ENSG00000106004

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27181166 - 27183274

NM_019102 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17092718099527181703
71013322718266427183286

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3863578Full LengthBC013682homeobox A5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061975  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019102 NP_061975 P20719 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC013682 AAH13682 P20719
BT009744 AAP88746 P20719
DQ893761 ABM84687  
DQ890593 ABM92210  
CR542256 CAG47052 P20719
CR542277 CAG47073 Q6FG31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXA5 NP_061975 M.musculus Hoxa5 15402 Gene Info NP_034583 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)