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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT16, keratin 16
Sequence ID:NM_005557
RefSeqGene ID:NG_008301
Entrez Gene ID:3868
Ensembl ID:ENSG00000186832

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EPIDERMOLYTIC PALMOPLANTAR KERATODERMAKRT1
KRT9
PACHYONYCHIA CONGENITA, JADASSOHN-LEWANDOWSKY TYPEKRT6A
PALMOPLANTAR KERATODERMA, NONEPIDERMOLYTICKRT1
PALMOPLANTAR KERATODERMA, NONEPIDERMOLYTIC,FOCAL 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39766034 - 39768954

NM_005557 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
62543976603239766280
2553013976644139766487
3025223976658239766802
5236483976710539767230
6498103976732039767481
8119673976759639767752
96810503976789039767972
105117203976840939769078

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4752995Full LengthBC039169keratin 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005548  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005557 NP_005548 P08779 Filament

Related Sequences

 
mRNAGenPeptSwissProt
S72493 AAB30058 Q16195
S79867 AAB35421 P08779
AF061812 AAC99326 P08779
BC039169 AAH39169 P08779
DQ891307 ABM82233  
DQ896818 ABM87817  
AK290853 BAF83542 P08779

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT16 NP_005548 M.musculus Krt16 16666 Gene Info NP_032496 86
R.norvegicus Krt16 303530   NP_001008752 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)