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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SAP30BP, SAP30 binding protein
Sequence ID:NM_013260
Entrez Gene ID:29115
Ensembl ID:ENSG00000161526

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal medulla, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73663452 - 73702838

 Exon Info From UCSC:
NM_013260

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3346233Full LengthBC007592SAP30 binding protein
5229398Full LengthBC030233SAP30 binding protein
6502502Full LengthBC063793SAP30 binding protein
3028192IncompleteBC013409SAP30 binding protein
4139101IncompleteBC011724SAP30 binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037392  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013260 NP_037392 Q9UHR5 HCNGP

Related Sequences

 
mRNAGenPeptSwissProt
AF119664 AAF17221 Q9UHR5
BC007592 AAH07592 Q9UHR5
BC013409 AAH13409 Q9UHR5
BC030233 AAH30233 Q9UHR5
BC063793 AAH63793 Q9UHR5
AF450482 AAL47177 Q9UHR5
AY082382 AAL92491 Q9UHR5
AF087869 AAM10497 Q9UHR5
EU446793 ABZ92322  
AK095265 BAC04514 Q9UHR5
AK002202 BAG51029 Q9UHR5
AK298060 BAH12715 B7Z4X9
AL049465 CAH56422 Q659G6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SAP30BP NP_037392 R.norvegicus Sap30bp 360662   NP_001101775 97
M.musculus Sap30bp 57230 Gene Info NP_065229 96
A.gambiae AgaP_AGAP007098 1270005   XP_308660 50
D.melanogaster CG2063 35952   NP_610475 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)