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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RHBDL3, Rhomboid, veinlet-like 3 (Drosophila)
Sequence ID:NM_138328
Entrez Gene ID:162494
Ensembl ID:ENSG00000141314

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 30593194 - 30648438

NM_138328 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11253059319430593318
1261493059492030594943
1503083061167730611835
3095333061581030616034
5346823062131230621460
6837953062511030625222
7968963063235930632459
8979573064325030643310
95846613064797630651679

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40005244Full LengthBC100975rhomboid, veinlet-like 3 (Drosophila)
40005246Full LengthBC100977rhomboid, veinlet-like 3 (Drosophila)
40005247Full LengthBC100978rhomboid, veinlet-like 3 (Drosophila)
40005245IncompleteBC100976rhomboid, veinlet-like 3 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612201  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_138328 NP_612201 P58872 EC 3.4.21.105 efhand
Rhomboid

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC100975 AAI00976 P58872 EC 3.4.21.105
BC100976 AAI00977 A4FU16  
BC100977 AAI00978 Q495Y5  
BC100978 AAI00979 Q495Y4  
AK124570 BAG54052 Q495Y4  
AJ313480 CAC86145 P58872 EC 3.4.21.105

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RHBDL3 NP_612201 M.musculus Rhbdl3 246104 Gene Info NP_631974 96
R.norvegicus Rhbdl3 287556   NP_001099289 96
A.gambiae AgaP_AGAP005058 1274741   XP_313932 44
D.melanogaster stet 38169   NP_788450 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)