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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GIPC1, GIPC PDZ domain containing family, member 1
Sequence ID:NM_202467
NM_005716
NM_202468
NM_202469
NM_202470
NM_202494
Entrez Gene ID:10755
Ensembl ID:ENSG00000123159

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 14588584 - 14593559

 Exon Info From UCSC:
NM_202467
NM_005716
NM_202468
NM_202469
NM_202470
NM_202494

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2960992Full LengthBC000410GIPC PDZ domain containing family, member 1
2960992Full LengthBC012810GIPC PDZ domain containing family, member 1
3530664Full LengthBC016169GIPC PDZ domain containing family, member 1
3538778IncompleteBC004226GIPC PDZ domain containing family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_974197  NP_974198  NP_005707  NP_974223  NP_974199  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005716 NP_005707 O14908 PDZ
NM_202468 NP_974197 O14908 PDZ
NM_202469 NP_974198   PDZ
NM_202470 NP_974199 O14908 PDZ
NM_202494 NP_974223   PDZ

Related Sequences

 
mRNAGenPeptSwissProt
AF028824 AAB84249 O14908
AF089816 AAC67548 O14908
BC000410 AAH00410 O14908
BC004226 AAH04226 O14908
BC012810 AAH12810 O14908
BC016169 AAH16169 O14908
DQ894539 ABM85465  
AK290252 BAF82941 A8K2I7
AK290948 BAF83637 O14908

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GIPC1 NP_005707 M.musculus Gipc1 67903 Gene Info NP_061241 96
R.norvegicus Gipc1 83823   NP_445793 96
C.elegans F44D12.4 177865   NP_501810 41
C.elegans C35D10.2 175649   NP_498017 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)