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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABCF2, ATP-binding cassette, sub-family F (GCN20), member 2
Sequence ID:NM_005692
NM_007189
Entrez Gene ID:10061
Ensembl ID:ENSG00000033050

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 150910595 - 150912171

 Exon Info From UCSC:
NM_005692
NM_007189

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988125Full LengthBC001661ATP-binding cassette, sub-family F (GCN20), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009120  NP_005683  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005692 NP_005683 Q75MJ1 ABC_tran
NM_007189 NP_009120 Q9UG63 ABC_tran

Related Sequences

 
mRNAGenPeptSwissProt
AF091073 AAC72942 O95324
AF261091 AAG13902 Q9UG63
AF261092 AAG13903 Q9UG63
BC001661 AAH01661 Q9UG63
BT007451 AAP36119 Q9UG63
DQ892304 ABM83230  
DQ895503 ABM86429  
AJ005016 CAA06290 Q9UG63
AL050291 CAB43392 Q9UG63
Q75MJ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCF2 NP_005683 M.musculus Abcf2 27407 Gene Info NP_038881 99
A.gambiae AgaP_AGAP002693 1273267   XP_312228 70
D.melanogaster CG9281 32508   NP_573057 70
A.thaliana GCN1 836200   NP_200887 65
C.elegans abcf-2 176771   NP_499779 63
S.cerevisiae ARB1 856758   NP_010953 52
N.crassa NCU08920 3874827   XP_958689 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)