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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DPM1, Dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
Sequence ID:NM_003859
RefSeqGene ID:NG_008923
Entrez Gene ID:8813
Ensembl ID:ENSG00000000419

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 49551406 - 49575039

NM_003859 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13694955140449551772
3704844955268449552798
4855534955740149557469
5546494955856749558662
6506754956227349562298
6767524956238349562459
7537864956516549565198
7878864957172249571821
88710474957489949575059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3997453Full LengthBC007073dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
4083041Full LengthBC016322dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
4276338Full LengthBC008466dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
4282974IncompleteBC008427dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003850  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003859 NP_003850 O60762 EC 2.4.1.83 Glycos_transf_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF007875 AAC98797 O60762 EC 2.4.1.83
BC007073 AAH07073 O60762 EC 2.4.1.83
BC008466 AAH08466 Q96HK0  
BC016322 AAH16322 O60762 EC 2.4.1.83
HQ447146 ADQ31633    
D86198 BAA25646 O60762 EC 2.4.1.83
AK289569 BAF82258 O60762 EC 2.4.1.83
CR456926 CAG33207 O60762 EC 2.4.1.83

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DPM1 NP_003850 M.musculus Dpm1 13480 Gene Info NP_034202 91
R.norvegicus Dpm1 296394   NP_001100014 91
A.gambiae AgaP_AGAP009866 1279285   XP_318984 80
D.melanogaster CG10166 35240   NP_609980 75
S.pombe dpm1 2543121   NP_594017 67
C.elegans dpm-1 176874   NP_499931 65
A.thaliana AT1G20575 838646   NP_564118 64
N.crassa NCU07965 3878237   XP_962098 63
P.falciparum DPM1 810973   XP_001348097 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)