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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TXNRD1, thioredoxin reductase 1
Sequence ID:NM_001093771
NM_001261445
NM_001261446
NM_003330
NM_182729
NM_182742
NM_182743
RefSeqGene ID:NG_029392
Entrez Gene ID:7296
Ensembl ID:ENSG00000198431

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23-q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 104682726 - 104744062

 Exon Info From UCSC:
NM_001093771
NM_003330
NM_182729
NM_182742
NM_182743

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3883490Full LengthBC018122thioredoxin reductase 1

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001093771 NP_001087240 Q16881 EC 1.8.1.9  
NM_001261445 NP_001248374      
NM_001261446 NP_001248375      
NM_003330 NP_003321      
NM_182729 NP_877393      
NM_182742 NP_877419      
NM_182743 NP_877420      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
S79851 AAB35418 Q16881 EC 1.8.1.9
AF077367 AAC69621 Q16881 EC 1.8.1.9
AF208018 AAF15900 Q16881 EC 1.8.1.9
BC018122 AAH18122 Q16881 EC 1.8.1.9
AY057105 AAL15432 Q16881 EC 1.8.1.9
AY344081 AAQ62461 Q16881 EC 1.8.1.9
AY344083 AAQ62462 Q16881 EC 1.8.1.9
AY344084 AAQ62463 Q16881 EC 1.8.1.9
AY344086 AAQ62464 Q16881 EC 1.8.1.9
AY344087 AAQ62465 Q16881 EC 1.8.1.9
AY344089 AAQ62466 Q16881 EC 1.8.1.9
AY344092 AAQ62467 Q16881 EC 1.8.1.9
AY344093 AAQ62468 Q16881 EC 1.8.1.9
AY344095 AAQ62469 Q16881 EC 1.8.1.9
AY344096 AAQ62470 Q16881 EC 1.8.1.9
AY344670 AAQ62471 Q16881 EC 1.8.1.9
AY344673 AAQ62472 Q16881 EC 1.8.1.9
AY344679 AAQ62473 Q16881 EC 1.8.1.9
BT019640 AAV38446 Q16881 EC 1.8.1.9
D88687 BAA13674 Q16881 EC 1.8.1.9
AK128515 BAC87474 Q6ZR44  
AK312262 BAG35193 B2R5P6  
AK293322 BAH11490 B7Z1F4  
AK295067 BAH11961 B7Z2S5  
AK296495 BAH12374 B7Z3Y8  
AK304241 BAH14140 B7Z904  
AJ001050 CAA04503 Q16881 EC 1.8.1.9
X91247 CAA62629 Q16881 EC 1.8.1.9
CR536506 CAG38744 Q16881 EC 1.8.1.9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TXNRD1 NP_001087240 M.musculus Txnrd1 50493 Gene Info NP_001035988 91
R.norvegicus Txnrd1 58819   NP_113802 91
C.elegans trxr-1 177466   NP_501085 57
A.thaliana GR1 822003   NP_001030756 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)