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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KDM4B, Lysine (K)-specific demethylase 4B
Sequence ID:NM_015015
Entrez Gene ID:23030
Ensembl ID:ENSG00000127663

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 4969131 - 5153606

 Exon Info From UCSC:
NM_015015

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020601Full LengthBC136611jumonji domain containing 2B
9052812Full LengthBC144292jumonji domain containing 2B
5785435IncompleteBC040014jumonji domain containing 2B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055830  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015015 NP_055830 O94953 PHD
JmjC
JmjN

Related Sequences

 
mRNAGenPeptSwissProt
BC063889 AAH63889 O94953
BC136611 AAI36612 O94953
BC144292 AAI44293 B7ZM63
AB020683 BAA74899 O94953
AK090405 BAC03386 Q8NF74
AK126854 BAG54381 B3KX69
AL133622 CAB63748 O94953
XM_003118784 XP_003118832  
XM_003119707 XP_003119755  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KDM4B NP_055830 M.musculus Kdm4b 193796 Gene Info NP_742144 84
R.norvegicus LOC301128 301128   NP_001037701 84
A.gambiae AgaP_AGAP006770 1270293   XP_308975 65
D.melanogaster Kdm4A 35744   NP_610331 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)