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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATAT1, Alpha tubulin acetyltransferase 1
Sequence ID:NM_024909
NM_001254952
NM_001031722
Entrez Gene ID:79969
Ensembl ID:ENSG00000137343

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 30594662 - 30612448

 Exon Info From UCSC:
NM_024909
NM_001031722

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820493Full LengthBC006105chromosome 6 open reading frame 134
4914615Full LengthBC047303chromosome 6 open reading frame 134

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079185  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001031722 NP_001026892    
NM_001254952 NP_001241881    
NM_024909 NP_079185   DUF738

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC006105 AAH06105 Q5SQI0 EC 2.3.1.108
BC025755 AAH25755 Q8TAV6  
BC047303 AAH47303 Q5SQI0 EC 2.3.1.108
AK023220 BAB14472 Q5SQI0 EC 2.3.1.108
AB075512 BAE45758 Q5SQI0 EC 2.3.1.108
AK297661 BAH12643 B7Z4Q7  
AK298743 BAH12864 B7Z5C8  
AL833858 CAD38717 Q5SQI0 EC 2.3.1.108

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATAT1 NP_001026892 R.norvegicus Atat1 361789   NP_997663 88
M.musculus Atat1 73242 Gene Info NP_001136216 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)