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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GRIN3A, glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
Sequence ID:NM_133445
Entrez Gene ID:116443
Ensembl ID:ENSG00000198785

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 104331634 - 104500862

NM_133445 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
24162104331634104335794
41634239104340049104340125
42404404104341477104341641
44054556104375657104375808
45574672104385599104385714
46734818104390537104390682
48195866104432341104433388
58676471104448877104449481
64727771104499562104500861

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860109Full LengthBC167432glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
40146888Full LengthBC132866glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
40146890Full LengthBC132868glutamate receptor, ionotropic, N-methyl-D-aspartate 3A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_597702  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133445 NP_597702 Q8TCU5 Lig_chan
SBP_bac_3

Related Sequences

 
mRNAGenPeptSwissProt
BC132866 AAI32867 A2RUE7
BC132868 AAI32869 A2RUE7
BC167432 AAI67432 Q8TCU5
AF416558 AAL40734 Q8TCU5
AB075853 BAB85559 Q8TCU5
AJ416950 CAC95229 Q8TCU5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GRIN3A NP_597702 M.musculus Grin3a 242443 Gene Info NP_001028523 93
R.norvegicus Grin3a 191573   XP_002729529 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)