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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. BRWD1, Bromodomain and WD repeat domain containing 1
Sequence ID:NM_033656
NM_018963
NM_001007246
RefSeqGene ID:NG_029919
Entrez Gene ID:54014
Ensembl ID:ENSG00000185658

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 40565742 - 40685516

 Exon Info From UCSC:
NM_033656
NM_018963
NM_001007246

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4388745IncompleteBC031545bromodomain and WD repeat domain containing 1
5287569IncompleteBC047058bromodomain and WD repeat domain containing 1
100000979BC140079bromodomain and WD repeat domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_387505  NP_061836  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001007246 NP_001007247    
NM_018963 NP_061836 Q9NSI6 WD40
Bromodomain
NM_033656 NP_387505   WD40
Bromodomain

Related Sequences

 
mRNAGenPeptSwissProt
BC064602 AAH64602 Q9NSI6
BC140079 AAI40080  
BC142986 AAI42987 A5PLN2
AB080586 BAD74071 Q9NSI6
AB080587 BAD74072 Q9NSI6
AB080588 BAD74073 Q5R2U9
AB080589 BAD74074 Q5R2U8
AB080590 BAD74075 Q5R2U7
AB080591 BAD74076 Q5R2U6
AB080592 BAD74077 Q5R2U5
AB080593 BAD74078 Q5R2U4
AJ222636 CAA10896 Q9NSI6
AJ238214 CAC37033 Q9NSI6
AJ292465 CAC44371 Q9NSI6
AJ292466 CAC44372 Q9NSI6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BRWD1 NP_061836 M.musculus Brwd1 93871 Gene Info NP_660107 81
R.norvegicus Brwd1 304061   NP_001100576 68
A.gambiae AgaP_AGAP002030 1281087   XP_321024 42
D.melanogaster BRWD3 42898   NP_732982 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)