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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BIN3, bridging integrator 3
Sequence ID:NM_018688
Entrez Gene ID:55909
Ensembl ID:ENSG00000147439

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 22478225 - 22526624

NM_018688 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1911512247794822479080
115212862248142722481561
128714282248173422481875
142914692248747622487516
147016062248795422488090
160716682249403722494098
166917092249443422494474
171017582250226722502315
175918632252655622526660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3534031Full LengthBC001223bridging integrator 3
3953604Full LengthBC009824bridging integrator 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061158  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018688 NP_061158 Q9NQY0 BAR

Related Sequences

 
mRNAGenPeptSwissProt
AF271732 AAF76218 Q9NQY0
BC001223 AAH01223 Q9NQY0
BC009824 AAH09824 Q9NQY0
HQ447205 ADQ31692  
AK001289 BAA91603 Q9NQY0
AK023980 BAB14751 Q9NQY0
AK090446 BAC03427 Q8NF35
AK222470 BAD96190 Q53HW0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BIN3 NP_061158 M.musculus Bin3 57784 Gene Info NP_067303 94
R.norvegicus Bin3 361065   NP_001013204 94
N.crassa NCU01069 3877757   XP_961681 31
S.pombe hob3 2541160   NP_595489 30
S.cerevisiae RVS161 850367   NP_009935 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)