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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PYCR2, pyrroline-5-carboxylate reductase family, member 2
Sequence ID:NM_001271681
NM_013328
Entrez Gene ID:29920
Ensembl ID:ENSG00000143811

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 226108086 - 226111959

Transcript StartTranscript EndChromosomal Start Chromosomal End
17756226107580226108319
757920226108907226109070
9211013226109251226109343
10141235226109557226109778
12361415226109903226110082
14161486226111400226111470
14871708226111743226111964

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2901360Full LengthBC020553pyrroline-5-carboxylate reductase family, member 2
3919161Full LengthBC014868pyrroline-5-carboxylate reductase family, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037460  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001271681 NP_001258610      
NM_013328 NP_037460 Q96C36 EC 1.5.1.2 F420_oxidored

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151351 AAD34611 Q4W8W1  
BC014868 AAH14868 Q96C36 EC 1.5.1.2
BC020553 AAH20553 Q96C36 EC 1.5.1.2
AF087859 AAP97169 Q96C36 EC 1.5.1.2
HQ447797 ADQ32281    
AK291913 BAF84602 Q96C36 EC 1.5.1.2
AK001508 BAG50929 B3KMB7  
AL834217 CAD38899 Q8NCZ0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PYCR2 NP_037460 R.norvegicus Pycr2 364064   NP_001012208 93
M.musculus Pycr2 69051 Gene Info NP_598466 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)