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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZCCHC7, Zinc finger, CCHC domain containing 7
Sequence ID:NM_032226
Entrez Gene ID:84186
Ensembl ID:ENSG00000147905

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 37349382 - 37356970

NM_032226 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11523712046837120619
1537833712630837126938
7848273730218437302227
8289533730418437304309
95411243730554037305710
112511603732779537327830
116112563734935337349448
125713713735470637354820
137226833735683137358142

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5399765Full LengthBC036940zinc finger, CCHC domain containing 7
4046616IncompleteBC005990zinc finger, CCHC domain containing 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115602  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032226 NP_115602 Q8N3Z6 zf-CCHC

Related Sequences

 
mRNAGenPeptSwissProt
AF161349 AAF28909 Q8N3Z6
BC005990 AAH05990 Q05DN1
BC022434 AAH22434 Q8N3Z6
BC036940 AAH36940 Q8N3Z6
HQ257914 ADR82669  
AK026264 BAB15418 Q8N3Z6
AK074608 BAC11087 Q8N3Z6
AK315128 BAG37581 Q8N3Z6
AK303193 BAG64286 B4E024

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZCCHC7 NP_115602 M.musculus Zcchc7 319885 Gene Info NP_613056 66
R.norvegicus Zcchc7 298086   NP_001100128 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)