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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CASP6, caspase 6, apoptosis-related cysteine peptidase
Sequence ID:NM_001226
RefSeqGene ID:NG_029187
Entrez Gene ID:839
Ensembl ID:ENSG00000138794

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 110610036 - 110624577

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820468Full LengthBC000305caspase 6, apoptosis-related cysteine peptidase
2820468Full LengthBC004460caspase 6, apoptosis-related cysteine peptidase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116787  NP_001217  

Protein Infomation

NM_001226 NP_001217 P55212 EC Peptidase_C14
NM_032992 NP_116787     Peptidase_C14

Related Sequences

U20536 AAC50168 P55212 EC
U20537 AAC50169 P55212 EC
BC000305 AAH00305 P55212 EC
BC004460 AAH04460 P55212 EC
DQ894589 ABM85515    
EU176306 ABW03757    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CASP6 NP_001217 M.musculus Casp6 12368 Gene Info NP_033941 92
R.norvegicus Casp6 83584   NP_113963 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta