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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRIM2, primase, DNA, polypeptide 2 (58kDa)
Sequence ID:NM_000947
Entrez Gene ID:5558

Database Links

UniGeneEntrez GeneOMIMHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p12-p11.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 57182425 - 57248374

 Exon Info From UCSC:
NM_000947

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6148494Full LengthBC064931primase, DNA, polypeptide 2 (58kDa)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000938  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000947 NP_000938 P49643 DNA_primase_lrg

Related Sequences

 
mRNAGenPeptSwissProt
BC017833 AAH17833 P49643
BC064931 AAH64931 P49643
EU447001 ABZ92530  
AK291915 BAF84604 A8K7A0
X74331 CAA52378 P49643

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRIM2 XP_003403487 M.musculus Prim2 19076 Gene Info NP_032948 88
R.norvegicus Prim2 301323   NP_001019933 87
A.thaliana AT1G67320 843052   NP_001185339 43
C.elegans pri-2 173122   NP_493176 41
N.crassa NCU04646 3875327   XP_959189 40
A.gambiae AgaP_AGAP006387 1276999   XP_316421 40
S.pombe spp2 2539933   NP_596380 40
D.melanogaster DNApol-alpha60 44915   NP_652001 38
S.cerevisiae PRI2 853821   NP_012879 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)