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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LAMA4, laminin, alpha 4
Sequence ID:NM_001105206
NM_001105207
NM_001105208
NM_001105209
NM_002290
RefSeqGene ID:NG_008209
Entrez Gene ID:3910
Ensembl ID:ENSG00000112769

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 112430334 - 112575769

 Exon Info From UCSC:
NM_001105206
NM_001105207
NM_001105208
NM_001105209
NM_002290

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6164247Full LengthBC066552laminin, alpha 4
4702204IncompleteBC026237laminin, alpha 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002281  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001105206 NP_001098676    
NM_001105207 NP_001098677    
NM_001105208 NP_001098678    
NM_001105209 NP_001098679    
NM_002290 NP_002281 Q5D044 Laminin_EGF
Laminin_G_2
Laminin_I
Laminin_II

Related Sequences

 
mRNAGenPeptSwissProt
S78569 AAB34635 Q16363
U77706 AAB36540 Q99737
BC004241 AAH04241 Q16363
BC026237 AAH26237 Q05CF9
BC066552 AAH66552 Q5D044
BT006690 AAP35336 Q16363
JF432726 ADZ15943  
AB210027 BAE06109 Q16363
AK304401 BAH14174 B7Z938
X70904 CAA50261 Q16363
X76939 CAA54258 Q16363
X91171 CAA62596 Q16363
Q5D044
CR407622 CAG28550 Q6LET9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LAMA4 NP_001098677 M.musculus Lama4 16775 Gene Info NP_034811 89
R.norvegicus Lama4 309816   NP_001101105 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta