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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT15, keratin 15
Sequence ID:NM_002275
RefSeqGene ID:NG_012284
Entrez Gene ID:3866
Ensembl ID:ENSG00000171346

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39669997 - 39677971

NM_002275 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
233973966999739670371
3984233967090039670925
4246443967172339671943
6457703967213639672261
7719323967235539672516
93310893967305939673215
109011723967333439673416
117318613967458139675269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3610392Full LengthBC002641keratin 15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002266  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002275 NP_002266   Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC002641 AAH02641 P19012
BT007261 AAP35925 P19012
DQ892990 ABM83916  
DQ896238 ABM87237  
AK090604 BAG52193 P19012
AK091239 BAG52314 B3KRA2
AK122864 BAG53767 B3KVF5
AK304059 BAG64966 B4E204
X07696 CAA30535 P19012

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT15 NP_002266 M.musculus Krt15 16665 Gene Info NP_032495 90
R.norvegicus Krt15 287700   NP_001004022 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)