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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT9, keratin 9
Sequence ID:NM_000226
RefSeqGene ID:NG_008300
Entrez Gene ID:3857
Ensembl ID:ENSG00000171403

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EPIDERMOLYTIC PALMOPLANTAR KERATODERMAKRT1
KRT16

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.1-q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39724812 - 39727807

NM_000226 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
43123972209539722403
3138303972348439724001
83110543972441339724636
105511803972475939724884
118113423972567739725838
134314993972611039726266
150015823972638939726471
158322903972760239728309

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068203Full LengthBC167813keratin 9
40122171IncompleteBC121170keratin 9

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000226 NP_000217 P35527  

Related Sequences

 
mRNAGenPeptSwissProt
S69510 AAC60619 P35527
BC121170 AAI21171 P35527
BC167813 AAI67813 P35527
AB001594 BAA19418 P35527
Z29074 CAA82315 P35527

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT9 NP_000217 M.musculus Krt9 107656 Gene Info NP_957707 73
R.norvegicus Krt9 266717   NP_703206 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)