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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT19, keratin 19
Sequence ID:NM_002276
RefSeqGene ID:NG_012285
Entrez Gene ID:3880
Ensembl ID:ENSG00000171345

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39680142 - 39681515

NM_002276 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
214003967986939680248
4015263968039439680519
5276883968063039680791
6898453968109439681250
8469283968144239681524
92914903968407939684640

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138504Full LengthBC002539keratin 19
3504206Full LengthBC007628keratin 19
3689178Full LengthBC010409keratin 19
6730698Full LengthBC084574keratin 19
30332499Full LengthBC067744keratin 19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002267  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002276 NP_002267 P08727 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC002539 AAH02539 P08727
BC007628 AAH07628 P08727
BC010409 AAH10409 P08727
BC067744 AAH67744 P08727
BC084574 AAH84574 P08727
DQ892179 ABM83105  
DQ895373 ABM86299  
AB041267 BAA94607 P08727
AB041268 BAA94608  
AK313261 BAG36071 P08727
Y00503 CAA68556 P08727

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT19 NP_002267 M.musculus Krt19 16669 Gene Info NP_032497 83
R.norvegicus Krt19 360626   NP_955792 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)