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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXB3, homeobox B3
Sequence ID:NM_002146
Entrez Gene ID:3213
Ensembl ID:ENSG00000120093

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46627246 - 46651849

NM_002146 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1123214662623246628542
232229274662938846629993
292830154663289246632979
301636274665119846651809

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069244Full LengthBC172550homeobox B3
100068936BC172242homeobox B3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002137  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002146 NP_002137 P14651 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
U59298 AAD10852 P14651
BC172242 AAI72242 P14651
BC172550 AAI72550  
AK291182 BAF83871 P14651
AK315102 BAG37563 P14651
AK027609 BAG51359 B3KNJ7
AK299226 BAH12974 B7Z5N8
AK299265 BAH12984 B7Z5P8
AK316245 BAH14616 B7ZAD0
X16667 CAA34657 P14651

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXB3 NP_002137 M.musculus Hoxb3 15410 Gene Info NP_001073338 96
R.norvegicus Hoxb3 303488   NP_001100512 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)