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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KDELR2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
Sequence ID:NM_001100603
NM_006854
Entrez Gene ID:11014
Ensembl ID:ENSG00000136240

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 6501392 - 6510037

 Exon Info From UCSC:
NM_001100603
NM_006854

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2966703Full LengthBC008081KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
3604062Full LengthBC012994KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
5477638Full LengthBC071982KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006845  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100603 NP_001094073    
NM_006854 NP_006845 P33947 ER_lumen_recept

Related Sequences

 
mRNAGenPeptSwissProt
BC008081 AAH08081 P33947
BC012994 AAH12994 P33947
BC071982 AAH71982 P33947
DQ892879 ABM83805  
DQ896128 ABM87127  
AK315702 BAG38064 P33947
X63745 CAA45277 P33947

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KDELR2 NP_006845 M.musculus Kdelr2 66913 Gene Info NP_080117 99
R.norvegicus LOC100360920 100360920   XP_002727985 99
A.thaliana ERD2B 822095   NP_566758 54
P.falciparum ERD2 813646   XP_001350248 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)