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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT13, keratin 13
Sequence ID:NM_002274
NM_153490
RefSeqGene ID:NG_008406
Entrez Gene ID:3860
Ensembl ID:ENSG00000171401

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
WHITE SPONGE NEVUSKRT4
KRT4

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12-q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39657233 - 39661865

 Exon Info From UCSC:
NM_002274
NM_153490

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3610361Full LengthBC002661keratin 13
5479174Full LengthBC077718keratin 13
8991900Full LengthBC126184keratin 13
9020483Full LengthBC136494keratin 13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705694  NP_002265  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002274 NP_002265   Filament
NM_153490 NP_705694 P13646 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC002661 AAH02661 P13646
BC077718 AAH77718 P13646
BC126184 AAI26185 A1A4E9
BC136494 AAI36495 A1A4E9
DQ890652 ABM81578  
DQ893832 ABM84758  
HQ258420 ADR83174  
AK092276 BAC03847 P13646
AK223051 BAD96771 P13646
AK223077 BAD96797 P13646
AK290244 BAF82933 A8K2H9
AK296806 BAG59379 B4DL17
X14640 CAA32786 P13646
X52426 CAA36673 P13646

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT13 NP_705694 M.musculus Krt13 16663 Gene Info NP_034792 88
R.norvegicus Krt13 287699   NP_001004021 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)