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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHML, choroideremia-like (Rab escort protein 2)
Sequence ID:NM_001821
Entrez Gene ID:1122
Ensembl ID:ENSG00000203668

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42-qterMitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 241792154 - 241794724

NM_001821 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
197082241792168241799231

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40125911Full LengthBC117360choroideremia-like (Rab escort protein 2)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001812  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001821 NP_001812 P26374 GDI

Related Sequences

 
mRNAGenPeptSwissProt
BC117360 AAI17361 P26374
AK314125 BAG36816 P26374
X64728 CAA45979 P26374

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHML NP_001812 M.musculus Chml 12663 Gene Info NP_067325 80
R.norvegicus Chml 689102   NP_001102994 79
C.elegans rep-1 175311   NP_001022928 37
A.thaliana REP 819832   NP_187306 32
S.cerevisiae MRS6 854552   NP_015015 32
N.crassa NCU03191 3881440   XP_965291 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)