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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHRNE, cholinergic receptor, nicotinic, epsilon (muscle)
Sequence ID:NM_000080
RefSeqGene ID:NG_008029
Entrez Gene ID:1145
Ensembl ID:ENSG00000108556

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MYASTHENIC SYNDROME, CONGENITAL, ASSOCIATED WITH ACETYLCHOLINE RECEPTOR DEFICIENCYCHRNB1
MUSK
RAPSN
MYASTHENIC SYNDROME, FAST-CHANNEL CONGENITALCHRNA1
CHRND
MYASTHENIC SYNDROME, SLOW-CHANNEL CONGENITALCHRNA1
CHRNB1
CHRND

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 4801068 - 4806369

 Exon Info From UCSC:
NM_000080

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063329Full LengthBC157043cholinergic receptor, nicotinic, epsilon
100062333BC156077cholinergic receptor, nicotinic, epsilon

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000071  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000080 NP_000071 Q04844 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
BC156077 AAI56078  
BC157043 AAI57044  
X66403 CAA47030 Q04844

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHRNE NP_000071 M.musculus Chrne 11448 Gene Info NP_033733 89
R.norvegicus Chrne 29422   NP_058890 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)