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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. POU4F1, POU class 4 homeobox 1
Sequence ID:NM_006237
Entrez Gene ID:5457
Ensembl ID:ENSG00000152192

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 79173229 - 79177695

NM_006237 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
634607917323179176685
346138177917733879177694

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015876Full LengthBC148792POU class 4 homeobox 1
5270933IncompleteBC041859POU domain, class 4, transcription factor 1
100015277BC148330POU class 4 homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006228  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006237 NP_006228 Q01851 Homeobox
Pou

Related Sequences

 
mRNAGenPeptSwissProt
L20433 AAA65605 Q01851
BC148330 AAI48331  
BC148792 AAI48793  
X64624 CAA45907 Q01851

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POU4F1 NP_006228 R.norvegicus Pou4f1 114503   XP_341373 99
M.musculus Pou4f1 18996 Gene Info NP_035273 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)