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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NBL1, neuroblastoma, suppression of tumorigenicity 1
Sequence ID:NM_001204084
NM_001204085
NM_001204086
NM_005380
NM_182744
Entrez Gene ID:4681
Ensembl ID:ENSG00000158747

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 19970248 - 19983909

 Exon Info From UCSC:
NM_005380
NM_182744

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3874204Full LengthBC012037neuroblastoma, suppression of tumorigenicity 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_877421  NP_005371  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204084 NP_001191013    
NM_001204085 NP_001191014    
NM_001204086 NP_001191015    
NM_001204088 NP_001191017    
NM_001204089 NP_001191018    
NM_005380 NP_005371 P41271 DAN
NM_182744 NP_877421 P41271 DAN

Related Sequences

 
mRNAGenPeptSwissProt
BC012037 AAH12037 P41271
AY049783 AAL15440 P41271
BT019423 AAV38230 P41271
D28124 BAA05671 P41271
AK289456 BAF82145 P41271
AK292101 BAF84790 P41271
AK313265 BAG36074 P41271
AK300872 BAG62517 P41271

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NBL1 NP_001191015 H.sapiens C1orf151-NBL1 100532736   NP_001191017 99
M.musculus Nbl1 17965 Gene Info NP_032701 94
R.norvegicus Nbl1 50594   NP_113797 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)